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All functions

clean_hla()
Correct the format of HLA alleles
count_alleles()
Count the number of alleles for each locus in an HLA typing string
db_get_version()
Print version of initialized IPD-IMGT/HLA database
db_initialize()
Load IPD-IMGT/HLA database
df_to_gl()
Convert multiple columns of HLA allele typings to a single-column GL String
etrl_hla
ETRL HLA Tables
extract_alleles_str() extract_alleles_df()
Split an HLA typing string into alleles
get_broad()
Retrieve broad-level serological equivalent of an HLA-allele
get_mismatches()
Determine mismatched antigens from typings
get_positive_eplets()
Lookup and filter eplets unique to positive beads
get_public()
Retrieve public epitope of serological HLA-allele
get_resolution()
Determine the level of resolution of an HLA-allele
get_serology()
Retrieve serological equivalents of an HLA-allele
get_split()
Retrieve split-level serological equivalent of an HLA-allele
gl_to_df()
Convert a vector of GL Strings to a data frame with one column per allele
is_in_ipd_db()
Lookup whether allele exists in IPD-IMGT/HLA database
load_eplet_registry()
Load HLA Eplet Registry table
lookup_alleles()
Lookup alleles corresponding to eplets in HLA Eplet Registry
lookup_eplets()
Lookup eplets corresponding to alleles in HLA Eplet Registry
mac_decode()
Decode a Multiple Allele Code (MAC) into an ambiguous HLA typing
mac_lookup()
Encode an ambiguous HLA typing into a Multiple Allele Code (MAC)
read_lum_csv()
Parse a Luminex single-antigen csv file into a data frame
reduce_to_field2()
Scale down HLA-alleles to two-field resolution
reduce_to_serology()
Retrieve serological equivalents of HLA alleles
upscale_typings()
Impute the resolution of an HLA typing from low to high (second field)
v2_to_v3
v2 to v3 HLA nomenclature conversion table
validate_allele()
Check whether an HLA typing is well-formed